TannerDowhy/albacore-playbook:latest
$ singularity pull shub://TannerDowhy/albacore-playbook:latest
Singularity Recipe
BootStrap: debootstrap
OSVersion: xenial
MirrorURL: http://us.archive.ubuntu.com/ubuntu/
%post
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-backports main restricted universe multiverse" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial main restricted" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial multiverse" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial universe" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates main restricted" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates multiverse" | tee -a /etc/apt/sources.list
echo "deb http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates universe" | tee -a /etc/apt/sources.list
echo "deb http://security.ubuntu.com/ubuntu xenial-security main restricted" | tee -a /etc/apt/sources.list
echo "deb http://security.ubuntu.com/ubuntu xenial-security multiverse" | tee -a /etc/apt/sources.list
echo "deb http://security.ubuntu.com/ubuntu xenial-security universe" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-backports main restricted universe multiverse" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial main restricted" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial multiverse" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial universe" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates main restricted" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates multiverse" | tee -a /etc/apt/sources.list
echo "deb-src http://nova.clouds.archive.ubuntu.com/ubuntu/ xenial-updates universe" | tee -a /etc/apt/sources.list
echo "deb-src http://security.ubuntu.com/ubuntu xenial-security main restricted" | tee -a /etc/apt/sources.list
echo "deb-src http://security.ubuntu.com/ubuntu xenial-security multiverse" | tee -a /etc/apt/sources.list
echo "deb-src http://security.ubuntu.com/ubuntu xenial-security universe" | tee -a /etc/apt/sources.list
apt-get -y update
apt-get -y install wget apt-transport-https python3 libboost-dev python3-pip python3-numpy python3-h5py
wget -O ont_albacore-2.3.1-cp35-cp35m-manylinux1_x86_64.whl https://mirror.oxfordnanoportal.com/software/analysis/ont_albacore-2.3.1-cp35-cp35m-manylinux1_x86_64.whl
pip3 install ont_albacore-2.3.1-cp35-cp35m-manylinux1_x86_64.whl
Collection
- Name: TannerDowhy/albacore-playbook
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/TannerDowhy-albacore-playbook-latest |
collection name | TannerDowhy/albacore-playbook |
branch | master |
tag | latest |
commit | 8f36fce131d2dc66de7bcc95b68ad6584c39741f |
version (container hash) | 52bf986d2dd6d8d7fddd485a31e35deb |
build date | 2018-08-28T03:21:34.930Z |
size (MB) | 1076 |
size (bytes) | 451244063 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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