SysBioChalmers/rnaseq:hebbe

$ singularity pull shub://SysBioChalmers/rnaseq:hebbe

Singularity Recipe

From:nfcore/base
Bootstrap:docker

%labels
    MAINTAINER Phil Ewels <phil.ewels@scilifelab.se>
    DESCRIPTION Singularity image containing all requirements for the nf-core/rnaseq pipeline
    VERSION 1.1

%environment
    PATH=/opt/conda/envs/nf-core-rnaseq-1.1/bin:$PATH
    export PATH

%files
    environment.yml /

%post
    /opt/conda/bin/conda env create -f /environment.yml
    /opt/conda/bin/conda clean -a
    mkdir -p /c3se
    mkdir -p /local
    mkdir -p /apps
    mkdir -p /priv
    mkdir -p /usr/share/lmod/lmod
    mkdir -p /var/hasplm
    mkdir -p /var/opt/thinlinc
    mkdir -p /usr/lib64
    touch /usr/lib64/libdlfaker.so
    touch /usr/lib64/libvglfaker.so
    touch /usr/bin/nvidia-smi

Collection


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Metrics

key value
id /containers/SysBioChalmers-rnaseq-hebbe
collection name SysBioChalmers/rnaseq
branch hebbe
tag hebbe
commit aa871ae163e77e6720a25d2af268b35346c5beeb
version (container hash) 8830c7a29a61f255c5afadcccd99680d
build date 2019-12-13T16:41:22.231Z
size (MB) 3342
size (bytes) 1072554015
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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