SysBioChalmers/rnaseq:hebbe
$ singularity pull shub://SysBioChalmers/rnaseq:hebbe
Singularity Recipe
From:nfcore/base
Bootstrap:docker
%labels
MAINTAINER Phil Ewels <phil.ewels@scilifelab.se>
DESCRIPTION Singularity image containing all requirements for the nf-core/rnaseq pipeline
VERSION 1.1
%environment
PATH=/opt/conda/envs/nf-core-rnaseq-1.1/bin:$PATH
export PATH
%files
environment.yml /
%post
/opt/conda/bin/conda env create -f /environment.yml
/opt/conda/bin/conda clean -a
mkdir -p /c3se
mkdir -p /local
mkdir -p /apps
mkdir -p /priv
mkdir -p /usr/share/lmod/lmod
mkdir -p /var/hasplm
mkdir -p /var/opt/thinlinc
mkdir -p /usr/lib64
touch /usr/lib64/libdlfaker.so
touch /usr/lib64/libvglfaker.so
touch /usr/bin/nvidia-smi
Collection
- Name: SysBioChalmers/rnaseq
- License: MIT License
View on Datalad
Metrics
key | value |
---|---|
id | /containers/SysBioChalmers-rnaseq-hebbe |
collection name | SysBioChalmers/rnaseq |
branch | hebbe |
tag | hebbe |
commit | aa871ae163e77e6720a25d2af268b35346c5beeb |
version (container hash) | 8830c7a29a61f255c5afadcccd99680d |
build date | 2019-12-13T16:41:22.231Z |
size (MB) | 3342 |
size (bytes) | 1072554015 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.