Sylvia-Liang/torch14:latest

$ singularity pull shub://Sylvia-Liang/torch14:latest

Singularity Recipe

Bootstrap: docker
From: marcchpc/pytorch_cuda9

%environment
  # use bash as default shell
  SHELL=/bin/bash
  export SHELL
  
  # add CUDA paths
  CPATH="/usr/local/cuda/include:$CPATH"
  PATH="/usr/local/cuda/bin:$PATH"
  LD_LIBRARY_PATH="/usr/local/cuda/lib64:$LD_LIBRARY_PATH"
  CUDA_HOME="/usr/local/cuda"
  export CPATH PATH LD_LIBRARY_PATH CUDA_HOME
  
  # make conda accessible
  PATH=/opt/conda/envs/pytorch-py3.7/bin:$PATH
  export PATH

%setup
  # runs on host - the path to the image is $SINGULARITY_ROOTFS

%post
  # post-setup script

  # load environment variables
  . /environment

  # make environment file executable
  chmod +x /environment

  # default mount paths, files
  mkdir /scratch /data /work-zfs 
  touch /usr/bin/nvidia-smi
  
  # user requests (contact marcc-help@marcc.jhu.edu)
  /opt/conda/bin/conda install opencv scikit-learn scikit-image scipy pandas 
  /opt/conda/bin/conda install -c anaconda numpy pytest flake8 tensorflow-tensorboard
  /opt/conda/bin/conda install -c conda-forge tensorboardx tqdm protobuf onnx spectrum nibabel
  
  # try a pip install
  /opt/conda/bin/pip install torchtext
  /opt/conda/bin/pip install -U spacy
  /opt/conda/bin/pip install nltk
  /opt/conda/bin/pip install sparqlwrapper
  /opt/conda/bin/pip install tqdm
  /opt/conda/bin/conda install -c maciejkula -c pytorch spotlight=0.1.5
  /opt/conda/bin/pip install inflect
  /opt/conda/bin/pip install tagme
  /opt/conda/bin/pip install gensim
  /opt/conda/bin/pip install git+https://github.com/facebookresearch/fastText.git

%runscript
  # executes with the singularity run command
  # delete this section to use existing docker ENTRYPOINT command

%test
  # test that script is a success

Collection


View on Datalad

Metrics

key value
id /containers/Sylvia-Liang-torch14-latest
collection name Sylvia-Liang/torch14
branch master
tag latest
commit b6e47404a36899e687a5ca346034c8f9c1efecf4
version (container hash) 34c5c6fdc91e3bed3f887d7a9e7dc463
build date 2019-04-24T14:27:19.290Z
size (MB) 11523
size (bytes) 5916233759
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.