SupercomputingWales/singularity_hub:deeplabcut_cpu

$ singularity pull shub://SupercomputingWales/singularity_hub:deeplabcut_cpu

Singularity Recipe

Bootstrap:docker  
From:bethgelab/deeplearning:cuda9.0-cudnn7

%labels
MAINTAINER Thomas Green

%environment

%runscript
exec /bin/bash /bin/echo "Not supported"

%post
# Create some common mountpoints for systems without overlayfs
mkdir /scratch
mkdir /apps

# Update metadata on packages
apt-get update
# Install repo helper
apt-get install -y software-properties-common
# Run repo helper to install universe
add-apt-repository -y universe
apt-get update

# Install requested applications.
apt-get -y install ffmpeg
apt-get -y install python-wxgtk3.0
apt-get -y install python3-tk

# Install from pip
pip3 install --upgrade pip

pip3 install tensorflow==1.8

pip3 install deeplabcut

pip install ipywidgets

pip3 install ipywidgets

pip3 install seaborn

pip3 install https://extras.wxpython.org/wxPython4/extras/linux/gtk3/ubuntu-16.04/wxPython-4.0.3-cp36-cp36m-linux_x86_64.whl

Collection

• Name: SupercomputingWales/singularity_hub
• License: None

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