QuentinLetourneur/Let-it-bin:trimming
$ singularity pull shub://QuentinLetourneur/Let-it-bin:trimming
Singularity Recipe
Bootstrap: docker
From: ubuntu:16.04
%files
bin/alienTrimmerPF8contaminants.fasta /home/
%post
mkdir /pasteur
apt -y update
apt -y install wget build-essential gcj-jdk
cd /home
wget ftp://ftp.pasteur.fr/pub/gensoft/projects/AlienTrimmer/AlienTrimmer_0.4.0.tar.gz
tar -xzf AlienTrimmer_0.4.0.tar.gz
rm AlienTrimmer_0.4.0.tar.gz
cd AlienTrimmer_0.4.0/src
sed "s:-march=native::g" -i Makefile
make
mv AlienTrimmer /usr/local/bin/
Collection
- Name: QuentinLetourneur/Let-it-bin
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/QuentinLetourneur-Let-it-bin-trimming |
collection name | QuentinLetourneur/Let-it-bin |
branch | master |
tag | trimming |
commit | 4e03e7640366a8d25b3492994181c4d2e3e7bdf9 |
version (container hash) | 0689e6c02658358fc829096e0acdeab9 |
build date | 2019-12-06T17:28:44.738Z |
size (MB) | 560 |
size (bytes) | 213307423 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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