Old-Bull-Lee/ms4:xss

$ singularity pull shub://Old-Bull-Lee/ms4:xss

Singularity Recipe

Bootstrap: docker
FROM: continuumio/miniconda3:latest

%labels
    Maintainer Jeremy Magland
    Version 0.1.0
    InstalledBy Michael Montgomery
    TestedOn hpc.arizona.edu (with errors)(unsolved, as yet)
    

%setup

%post
  echo "#################### update & install GTK+3.0"
  
  apt-get update -y && apt-get upgrade -y
  apt-get install libgtk-3-0 -y
  apt-get install libxss1 -y


  echo "################################## Activating conda environment"
  . /opt/conda/etc/profile.d/conda.sh
  conda create -n mountainlab
  conda activate mountainlab

  echo "################################## Installing MountainLab"
  conda install -c flatiron -c conda-forge \
  		   	    mountainlab \
			    mountainlab_pytools \
			    ml_ephys \
			    ephys-viz \
			    ml_ms3 \
			    ml_ms4alg \
			    ml_pyms \
			    qt-mountainview

  echo "################################## Installing Python"
  conda install python=3.6
  
  echo "################################## Testing installation"
  ml-list-processors

%environment
  . /opt/conda/etc/profile.d/conda.sh
  conda activate mountainlab

Collection


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Metrics

key value
id /containers/Old-Bull-Lee-ms4-xss
collection name Old-Bull-Lee/ms4
branch master
tag xss
commit 40dd0ab4a5fba16910ca40247365f5998c5d88b7
version (container hash) 189fe7c568b720c04f5b8dd1ae0dabd1
build date 2018-11-19T20:38:17.880Z
size (MB) 4175
size (bytes) 1755361311
SIF Download URL (please use pull with shub://)
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