NBISweden/K9-WGS-Pipeline:gatk-3.5

$ singularity pull shub://NBISweden/K9-WGS-Pipeline:gatk-3.5

Singularity Recipe

bootstrap: docker
from:broadinstitute/gatk3:3.5-0

%labels
AUTHOR Johan Viklund
MAINTAINER johan.viklund@nbis.se

%post
apt-get install pkg-config

curl -LO https://github.com/vcftools/vcftools/releases/download/v0.1.15/vcftools-0.1.15.tar.gz
tar xzf vcftools-0.1.15.tar.gz
cd vcftools-0.1.15
./configure
make
make install

Collection


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Metrics

key value
id /containers/NBISweden-K9-WGS-Pipeline-gatk-3.5
collection name NBISweden/K9-WGS-Pipeline
branch master
tag gatk-3.5
commit 3bc6c48dd5b953c4579a1d967540f950d78015e8
version (container hash) 8fb5f4df47cedf6c81b10f141415cdd3
build date 2020-11-19T06:02:29.263Z
size (MB) 867
size (bytes) 346837023
SIF Download URL (please use pull with shub://)
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Singularity Recipe Singularity Recipe on Datalad
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