KnetML/singularity-images:latest
$ singularity pull shub://KnetML/singularity-images:latest
Singularity Recipe
Bootstrap: docker
From: ubuntu:latest
%environment
LANG=C.UTF-8
LC_ALL=C.UTF-8
export LANG LC_ALL
export LD_LIBRARY_PATH=/usr/lib:/usr/lib64:/usr/local/cuda/lib64:/usr/local/cuda/lib:/opt/cudnn/lib64:$LD_LIBRARY_PATH
export PATH=/opt/julia-0.6/bin:/usr/local/cuda/bin:$PATH
export JULIA_PKGDIR=/workdir/.julia
export XDG_RUNTIME_DIR="/workdir/notebooks"
export JUPYTER=/usr/local/bin/jupyter
export JUPYTER_PATH=/workdir/.jupyter
export JUPYTER_DATA_DIR=/workdir/.jupyter
%runscript
exec jupyter notebook --notebook-dir=/workdir/notebooks --ip='*' --port=8888 --no-browser
%post
echo "Here we are installing software and other dependencies for the container!"
apt-get update
apt-get install -y \
build-essential \
libzmq3-dev \
pkg-config \
python \
python-dev \
python-pip \
git \
vim \
emacs \
libxml2 \
wget \
curl \
unzip \
cmake \
hdf5-tools \
pip install jupyter
mkdir -p /opt/julia-0.6.2-dev && \
curl -s -L https://julialang-s3.julialang.org/bin/linux/x64/0.6/julia-0.6.2-linux-x86_64.tar.gz | tar -C /opt/julia-0.6.2-dev -x -z --strip-components=1 -f -
ln -fs /opt/julia-0.6.2-dev/bin/julia /usr/bin/julia
export JULIA_PKGDIR=/workdir/.julia
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.init()'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("CUDAapi")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("Knet")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("JLD")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("ArgParse")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("PyCall")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("Images")'
export JUPYTER=/usr/local/bin/jupyter
export JUPYTER_PATH=/workdir/.jupyter
export JUPYTER_DATA_DIR=/workdir/.jupyter
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.add("IJulia")'
/opt/julia-0.6.2-dev/bin/julia -e 'Pkg.build("IJulia")'
rm -rf /workdir/.julia/.cache
rm -rf /workdir/.julia/lib
mkdir -p /workdir/notebooks
chmod -R 777 /workdir
mkdir -p /opt/cudnn
mkdir -p /usr/local/cuda
Collection
- Name: KnetML/singularity-images
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/KnetML-singularity-images-latest |
collection name | KnetML/singularity-images |
branch | master |
tag | latest |
commit | 2d3c2b3648be93f2b087d57c2536a0f4296fcca4 |
version (container hash) | e04a2d4f2773ee1e780a4a760c965eb0 |
build date | 2021-01-21T14:37:52.958Z |
size (MB) | 1684 |
size (bytes) | 562257951 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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