KevinSayers/nvBowtie_Singularity:latest
$ singularity pull shub://KevinSayers/nvBowtie_Singularity:latest
Singularity Recipe
BootStrap: docker
From: nvidia/cuda:8.0-devel
%post
apt-get update
apt-get -y install wget build-essential zlib1g-dev
wget http://www.cmake.org/files/v3.2/cmake-3.2.2.tar.gz
tar xf cmake-3.2.2.tar.gz
cd cmake-3.2.2
./configure
make install
wget https://github.com/NVlabs/nvbio/archive/v1.1.00.tar.gz
tar -xvf v1.1.00.tar.gz
cd nvbio-1.1.00/
mkdir build
cd build/
cmake ..
cd nvBowtie/
make
mv nvBowtie /usr/local/bin/nvBowtie
cd ../nvBWT
make
mv nvBWT /usr/local/bin/nvBWT
Collection
- Name: KevinSayers/nvBowtie_Singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/KevinSayers-nvBowtie_Singularity-latest |
collection name | KevinSayers/nvBowtie_Singularity |
branch | master |
tag | latest |
commit | 857863c536871885c43aa7507a23e883616fa9be |
version (container hash) | 302f49037dbdd5596eb6baed242b0629 |
build date | 2017-11-04T04:49:58.762Z |
size (MB) | 2141 |
size (bytes) | 1063931935 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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