KevinSayers/nvBowtie_Singularity:latest

$ singularity pull shub://KevinSayers/nvBowtie_Singularity:latest

Singularity Recipe

BootStrap: docker
From: nvidia/cuda:8.0-devel

%post
    apt-get update
    apt-get -y install wget build-essential zlib1g-dev
    wget http://www.cmake.org/files/v3.2/cmake-3.2.2.tar.gz
    tar xf cmake-3.2.2.tar.gz
    cd cmake-3.2.2
    ./configure
    make install
    wget https://github.com/NVlabs/nvbio/archive/v1.1.00.tar.gz
    tar -xvf v1.1.00.tar.gz 
    cd nvbio-1.1.00/
    mkdir build
    cd build/
    cmake ..
    cd nvBowtie/
    make
    mv nvBowtie /usr/local/bin/nvBowtie
    cd ../nvBWT
    make
    mv nvBWT /usr/local/bin/nvBWT

Collection


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Metrics

key value
id /containers/KevinSayers-nvBowtie_Singularity-latest
collection name KevinSayers/nvBowtie_Singularity
branch master
tag latest
commit 857863c536871885c43aa7507a23e883616fa9be
version (container hash) 302f49037dbdd5596eb6baed242b0629
build date 2017-11-04T04:49:58.762Z
size (MB) 2141
size (bytes) 1063931935
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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