ISU-HPC/vg-toil-vg:latest

$ singularity pull shub://ISU-HPC/vg-toil-vg:latest

Singularity Recipe

Bootstrap: docker
from: quay.io/vgteam/vg:v1.13.0

%labels

MAINTAINER ynanyam@iastate.edu

%enviroment
LC_ALL=C
export LC_ALL

%post

apt-get update -y
apt-get install -y python-pip python-virtualenv

# Install toil and toil-vg
cd /opt
virtualenv toil-vg
. toil-vg/bin/activate
pip install toil[aws,mesos]==3.18.0
pip install toil-vg
echo "export PATH=/vg/bin:/vg/scripts:/opt/toil-vg/bin:$PATH" >>$SINGULARITY_ENVIRONMENT

Collection


View on Datalad

Metrics

key value
id /containers/ISU-HPC-vg-toil-vg-latest
collection name ISU-HPC/vg-toil-vg
branch master
tag latest
commit 013f09247bf95165bf65ef44cfb53541d20b7a96
version (container hash) c262107b669a1b13affa405877046bea
build date 2019-02-18T23:30:21.401Z
size (MB) 1061
size (bytes) 395100191
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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