ISU-HPC/vg-toil-vg:latest
$ singularity pull shub://ISU-HPC/vg-toil-vg:latest
Singularity Recipe
Bootstrap: docker
from: quay.io/vgteam/vg:v1.13.0
%labels
MAINTAINER ynanyam@iastate.edu
%enviroment
LC_ALL=C
export LC_ALL
%post
apt-get update -y
apt-get install -y python-pip python-virtualenv
# Install toil and toil-vg
cd /opt
virtualenv toil-vg
. toil-vg/bin/activate
pip install toil[aws,mesos]==3.18.0
pip install toil-vg
echo "export PATH=/vg/bin:/vg/scripts:/opt/toil-vg/bin:$PATH" >>$SINGULARITY_ENVIRONMENT
Collection
- Name: ISU-HPC/vg-toil-vg
- License: None
View on Datalad
Metrics
| key | value |
|---|---|
| id | /containers/ISU-HPC-vg-toil-vg-latest |
| collection name | ISU-HPC/vg-toil-vg |
| branch | master |
| tag | latest |
| commit | 013f09247bf95165bf65ef44cfb53541d20b7a96 |
| version (container hash) | c262107b669a1b13affa405877046bea |
| build date | 2019-02-18T23:30:21.401Z |
| size (MB) | 1061 |
| size (bytes) | 395100191 |
| SIF | Download URL (please use pull with shub://) |
| Datalad URL | View on Datalad |
| Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.