ISU-HPC/vg-toil-vg:latest
$ singularity pull shub://ISU-HPC/vg-toil-vg:latest
Singularity Recipe
Bootstrap: docker
from: quay.io/vgteam/vg:v1.13.0
%labels
MAINTAINER ynanyam@iastate.edu
%enviroment
LC_ALL=C
export LC_ALL
%post
apt-get update -y
apt-get install -y python-pip python-virtualenv
# Install toil and toil-vg
cd /opt
virtualenv toil-vg
. toil-vg/bin/activate
pip install toil[aws,mesos]==3.18.0
pip install toil-vg
echo "export PATH=/vg/bin:/vg/scripts:/opt/toil-vg/bin:$PATH" >>$SINGULARITY_ENVIRONMENT
Collection
- Name: ISU-HPC/vg-toil-vg
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/ISU-HPC-vg-toil-vg-latest |
collection name | ISU-HPC/vg-toil-vg |
branch | master |
tag | latest |
commit | 013f09247bf95165bf65ef44cfb53541d20b7a96 |
version (container hash) | c262107b669a1b13affa405877046bea |
build date | 2019-02-18T23:30:21.401Z |
size (MB) | 1061 |
size (bytes) | 395100191 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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