Hydrocarpentry/project_pysingularity:latest
$ singularity pull shub://Hydrocarpentry/project_pysingularity:latest
Singularity Recipe
# Singularity
Bootstrap: docker
From: ubuntu:18.04
%post
apt-get update && apt-get install -y python-pandas r-base
apt-get install wget
wget -O /hampt_rd_data.sqlite https://osf.io/mr7jx/?action=download
wget -O /STORM_data_flooded_streets_2010-2016.csv https://github.com/Hydrocarpentry/reproduced_data/blob/master/STORM_data_flooded_streets_2010-2016.csv
echo "r <- getOption('repos'); r['CRAN'] <- 'http://cran.us.r-project.org'; options(repos = r);" > ~/.Rprofile
R --slave -e "install.packages('caret')"
R --slave -e "install.packages('randomForest')"
R --slave -e "install.packages('getopt')"
%files
prepare_flood_events_table.py /tmp
make_dly_obs_table_standalone.py /tmp
by_event_for_model.py /tmp
model_flood_counts_rf_ps_cln.r /tmp
plot_count_model_results.py /tmp
test.sh /tmp
%runscript
bash /tmp/test.sh
Collection
- Name: Hydrocarpentry/project_pysingularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/Hydrocarpentry-project_pysingularity-latest |
collection name | Hydrocarpentry/project_pysingularity |
branch | master |
tag | latest |
commit | 1c574d3ee1b60ca7dba45e98d1c40f7509a7f963 |
version (container hash) | 46daa01a4cdd14aeb6be969209711f58 |
build date | 2018-07-27T11:59:51.499Z |
size (MB) | 2332 |
size (bytes) | 585093151 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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