HugoMananet/Gemini:gemini.0.20.1.def

$ singularity pull shub://HugoMananet/Gemini:gemini.0.20.1.def

Singularity Recipe

#!/bin/bash
Bootstrap: docker
From: phusion/baseimage:0.10.2


%label

	MAINTAINER Hugo Mananet

%post


    mkdir /soft
	mkdir /work
	mkdir /user1
	mkdir /user2
	mkdir /tmp3
    
    add-apt-repository ppa:deadsnakes/ppa
    apt-get update && \
	apt-get upgrade -y && \
	apt-get install -y build-essential \
    libpython2.7 \
    python2.7 \
    git \
    gcc \
    zlib1g-dev \
    wget \
    tabix

    wget https://raw.github.com/arq5x/gemini/master/gemini/scripts/gemini_install.py

    python2.7 gemini_install.py /usr/local /usr/local/share/gemini
    export PATH=$PATH:/usr/local/gemini/bin

    wget -P /opt/ https://github.com/arq5x/grabix/archive/0.1.6.tar.gz
    cd /opt && tar -xzvf 0.1.6.tar.gz
    cd /opt/grabix-0.1.6 && make

%runscript

    exec gemini "$@"

Collection


View on Datalad

Metrics

key value
id /containers/HugoMananet-Gemini-gemini.0.20.1.def
collection name HugoMananet/Gemini
branch master
tag gemini.0.20.1.def
commit bf8846e08b167c84dfdd3ba19c5e979efc5a0a3e
version (container hash) ce0d133aa74f056ed5bee2f170d637d5
build date 2018-12-21T17:01:17.137Z
size (MB) 15603
size (bytes) 14474231839
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.