Gkandoi/SingularityExample:latest
$ singularity pull shub://Gkandoi/SingularityExample:latest
Singularity Recipe
Bootstrap: docker
From: alpine
%post
apk update
apk add wget
wget http://github.com/bbuchfink/diamond/releases/download/v0.9.22/diamond-linux64.tar.gz
tar xzf diamond-linux64.tar.gz
wget https://raw.githubusercontent.com/upendrak/diamond_blast_docker/master/mouse.1.protein.faa
wget https://raw.githubusercontent.com/upendrak/diamond_blast_docker/master/zebrafish.1.protein.faa
%environment
export PATH=/:$PATH
%runscript
diamond
## Sample Singularity file created during NSF Cyber Carpentry 2018. Parts taken from the original Diamond dockerfile and lecture notes.
Collection
- Name: Gkandoi/SingularityExample
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/Gkandoi-SingularityExample-latest |
collection name | Gkandoi/SingularityExample |
branch | master |
tag | latest |
commit | 8e6587003ea191773ef24c26879103514d0ba0ca |
version (container hash) | 343f7acdaf24be61bd09264c7f465675 |
build date | 2018-07-20T04:10:47.464Z |
size (MB) | 14 |
size (bytes) | 7901215 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.