CompBio-TDU-Japan/containers:trimmomatic

$ singularity pull shub://CompBio-TDU-Japan/containers:trimmomatic

Singularity Recipe

Bootstrap: docker
FROM: openjdk:alpine

%post
    apk add --update --no-cache bash
    wget http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.36.zip
    unzip Trimmomatic-0.36.zip
    rm Trimmomatic-0.36.zip
    mv Trimmomatic-0.36 /data/

%runscript
    java -jar /data/trimmomatic-0.36.jar "$@"

Collection


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Metrics

key value
id /containers/CompBio-TDU-Japan-containers-trimmomatic
collection name CompBio-TDU-Japan/containers
branch master
tag trimmomatic
commit 58478a9f251d425fc6f576e300ac0cf22907274b
version (container hash) f2b43e7d24aeb87e7f15b975cc561873
build date 2018-11-16T10:50:05.350Z
size (MB) 111
size (bytes) 73441311
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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