CompBio-TDU-Japan/containers:snpeff
$ singularity pull shub://CompBio-TDU-Japan/containers:snpeff
Singularity Recipe
Bootstrap: docker
FROM: openjdk:alpine
%post
apk --update --no-cache add bash
wget https://jaist.dl.sourceforge.net/project/snpeff/snpEff_latest_core.zip
unzip snpEff_latest_core.zip
rm -rf snpEff_latest_core.zip
sed -i "s/.\/data\/$/~\/\.snpEff\/data/g" /snpEff/snpEff.config
%runscript
/snpEff/scripts/snpEff "$@"
Collection
- Name: CompBio-TDU-Japan/containers
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CompBio-TDU-Japan-containers-snpeff |
collection name | CompBio-TDU-Japan/containers |
branch | master |
tag | snpeff |
commit | 68ea77101b3b0fd5937328277b74e69fcc0a9746 |
version (container hash) | bce05d30cf40b4624a1adc63d157ab36 |
build date | 2018-03-27T03:22:06.198Z |
size (MB) | 264 |
size (bytes) | 143441951 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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