CompBio-TDU-Japan/containers:samtools
$ singularity pull shub://CompBio-TDU-Japan/containers:samtools
Singularity Recipe
Bootstrap: docker
FROM: alpine
%post
apk add --update --no-cache bash ncurses bzip2-dev xz-dev
apk --nocache add --virtual build-deps build-base build-base zlib-dev ncurses-dev musl-dev libcurl curl
wget https://github.com/samtools/samtools/releases/download/1.7/samtools-1.7.tar.bz2
tar xf samtools-1.7.tar.bz2
rm -rf samtools-1.7.tar.bz2
cd samtools-1.7
./configure
make
make install
cd ;apk del build-deps
rm -rf /samtools-1.7
%runscript
samtools "$@"
Collection
- Name: CompBio-TDU-Japan/containers
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CompBio-TDU-Japan-containers-samtools |
collection name | CompBio-TDU-Japan/containers |
branch | master |
tag | samtools |
commit | 58478a9f251d425fc6f576e300ac0cf22907274b |
version (container hash) | 3e8ea3d658ca24ee6e9424a3b7dbd5c7 |
build date | 2021-03-10T22:36:11.933Z |
size (MB) | 22 |
size (bytes) | 6787103 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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