CompBio-TDU-Japan/containers:bwa

$ singularity pull shub://CompBio-TDU-Japan/containers:bwa

Singularity Recipe

Bootstrap:docker
From:alpine

%post
    apk add --update --no-cache --virtual build-deps build-base zlib-dev
    apk add --update --no-cache bash
    wget https://github.com/lh3/bwa/releases/download/v0.7.17/bwa-0.7.17.tar.bz2
    tar xf bwa-0.7.17.tar.bz2
    cd bwa-0.7.17
    make
    apk del build-deps
    mv bwa /usr/local/bin/
    cd / ; rm -rf bwa-0.7.17

%runscript
    bwa "$@"

Collection


View on Datalad

Metrics

key value
id /containers/CompBio-TDU-Japan-containers-bwa
collection name CompBio-TDU-Japan/containers
branch master
tag bwa
commit 58478a9f251d425fc6f576e300ac0cf22907274b
version (container hash) 2fcc4f4f851635d1fba89d7251801373
build date 2018-11-16T10:50:05.368Z
size (MB) 16
size (bytes) 3973151
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
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