CompBio-TDU-Japan/containers:blast-legacy

$ singularity pull shub://CompBio-TDU-Japan/containers:blast-legacy

Singularity Recipe

Bootstrap: docker
FROM: alpine

%post
    apk --update --no-cache add --virtual=.build-deps ca-certificates wget
    apk --no-cache add bash libbz2
    wget -q -O /etc/apk/keys/sgerrand.rsa.pub https://alpine-pkgs.sgerrand.com/sgerrand.rsa.pub
    wget https://github.com/sgerrand/alpine-pkg-glibc/releases/download/2.28-r0/glibc-2.28-r0.apk
    wget https://github.com/sgerrand/alpine-pkg-glibc/releases/download/2.28-r0/glibc-bin-2.28-r0.apk
    apk add --nocache glibc-2.28-r0.apk
    apk add --nocache glibc-bin-2.28-r0.apk
    wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.4.0/ncbi-blast-2.4.0+-x64-linux.tar.gz
    tar xfvz ncbi-blast-2.4.0+-x64-linux.tar.gz
    mv ncbi-blast-2.4.0+/bin/* /usr/local/bin/
    rm glibc*.apk
    rm "/root/.wget-hsts"
    rm ncbi-blast-2.4.0+-x64-linux.tar.gz
    rm -r ncbi-blast-2.4.0+
    rm "/etc/apk/keys/sgerrand.rsa.pub"
    apk del .build-deps
    rm -r /usr/glibc-compat/bin
    rm -r /usr/glibc-compat/sbin

Collection


View on Datalad

Metrics

key value
id /containers/CompBio-TDU-Japan-containers-blast-legacy
collection name CompBio-TDU-Japan/containers
branch master
tag blast-legacy
commit ab664c077b9ff86bdc2dfcd1d96e004011194fce
version (container hash) 8fdca7aa1d4ac6c2017c5e1b22092aa7
build date 2018-11-16T10:50:05.360Z
size (MB) 629
size (bytes) 217899039
SIF Download URL (please use pull with shub://)
Datalad URL View on Datalad
Singularity Recipe Singularity Recipe on Datalad
We cannot guarantee that all containers will still exist on GitHub.