CompBio-TDU-Japan/containers:blast-latest
$ singularity pull shub://CompBio-TDU-Japan/containers:blast-latest
Singularity Recipe
Bootstrap: docker
FROM: alpine
%post
VERSION=2.7.1
apk --update --no-cache add --virtual=.build-deps ca-certificates wget
apk --no-cache add bash libbz2 libidn
wget -q -O /etc/apk/keys/sgerrand.rsa.pub https://alpine-pkgs.sgerrand.com/sgerrand.rsa.pub
wget https://github.com/sgerrand/alpine-pkg-glibc/releases/download/2.28-r0/glibc-2.28-r0.apk
wget https://github.com/sgerrand/alpine-pkg-glibc/releases/download/2.28-r0/glibc-bin-2.28-r0.apk
apk add --nocache glibc-2.28-r0.apk
apk add --nocache glibc-bin-2.28-r0.apk
wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${VERSION}/ncbi-blast-${VERSION}+-x64-linux.tar.gz
tar xfvz ncbi-blast-${VERSION}+-x64-linux.tar.gz
mv ncbi-blast-${VERSION}+/bin/* /usr/local/bin/
rm glibc*.apk
rm "/root/.wget-hsts"
rm ncbi-blast-${VERSION}+-x64-linux.tar.gz
rm -r ncbi-blast-${VERSION}+
rm "/etc/apk/keys/sgerrand.rsa.pub"
apk del .build-deps
rm -r /usr/glibc-compat/bin
rm -r /usr/glibc-compat/sbin
Collection
- Name: CompBio-TDU-Japan/containers
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CompBio-TDU-Japan-containers-blast-latest |
collection name | CompBio-TDU-Japan/containers |
branch | master |
tag | blast-latest |
commit | 1b7d007008caa2a8838890a045b3e8ce5726612b |
version (container hash) | 23e995c85e7c219584b89f0896c33183 |
build date | 2019-09-30T15:16:38.653Z |
size (MB) | 701 |
size (bytes) | 245792799 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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