Characterisation-Virtual-Laboratory/CharacterisationVL-Software:openrefine-3.1
$ singularity pull shub://Characterisation-Virtual-Laboratory/CharacterisationVL-Software:openrefine-3.1
Singularity Recipe
Bootstrap: shub
From: Characterisation-Virtual-Laboratory/CharacterisationVL-Software:1804
%labels
MAINTAINER_NAME Jay van Schyndel
MAINTAINER_EMAIL jay.vanschyndel@monash.edu
APPLICATION_NAME ubuntu
APPLICATION_VERSION 18.04
HARDWARE CPU
LAST_UPDATED 24-APR-2019
%environment
OPENREFINE_PATH=/opt/openrefine-3.1
export PATH=$OPENREFINE_PATH:$PATH
%post
echo "*********************************************************"
echo "Setup and display environment"
echo "*********************************************************"
export LC_ALL=en_AU.UTF-8
export LANGUAGE=en_AU.UTF-8
export DEBIAN_FRONTEND=noninteractive
echo $LC_ALL
echo $LANGUAGE
echo $DEBIAN_FRONTEND
echo "*********************************************************"
echo "Install repositories"
echo "*********************************************************"
apt-get install -y software-properties-common
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic main restricted'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic-updates main restricted'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic universe'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic-updates universe'
echo "*********************************************************"
echo "Update repositories and install desktop"
echo "*********************************************************"
apt update
apt upgrade -y
apt install -y locales
locale-gen en_AU.UTF-8
#Java required for OpenRefine
apt install -y default-jre
echo "================================="
echo " Installing OpenRefine 3.1 "
echo "================================="
cd /opt
wget -O openrefine-linux-3.1.tar.gz https://github.com/OpenRefine/OpenRefine/releases/download/3.1/openrefine-linux-3.1.tar.gz
tar -zxvf openrefine-linux-3.1.tar.gz
%runscript
$*
Collection
- Name: Characterisation-Virtual-Laboratory/CharacterisationVL-Software
- License: GNU General Public License v3.0
View on Datalad
Metrics
key | value |
---|---|
id | /containers/Characterisation-Virtual-Laboratory-CharacterisationVL-Software-openrefine-3.1 |
collection name | Characterisation-Virtual-Laboratory/CharacterisationVL-Software |
branch | master |
tag | openrefine-3.1 |
commit | 417f488e87f97f444c7ec8fa40eda4398c5f76fa |
version (container hash) | 18125bdcabebb0510466e791b001f24a |
build date | 2019-04-26T11:40:30.726Z |
size (MB) | 3556 |
size (bytes) | 1554980895 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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