Characterisation-Virtual-Laboratory/CharacterisationVL-Software:imblproc
$ singularity pull shub://Characterisation-Virtual-Laboratory/CharacterisationVL-Software:imblproc
Singularity Recipe
Bootstrap: shub
From: Characterisation-Virtual-Laboratory/CharacterisationVL-Software:1804
%labels
MAINTAINER_NAME Jay van Schyndel
MAINTAINER_EMAIL jay.vanschyndel@monash.edu
APPLICATION_NAME ubuntu
APPLICATION_VERSION 18.04
HARDWARE CPU
LAST_UPDATED 27-MAR-2019
%environment
export STITCHPATH=/opt/imblproc/bin
export PATH=$STITCHPATH:$PATH
%post
echo "*********************************************************"
echo "Setup and display environment"
echo "*********************************************************"
export LC_ALL=en_AU.UTF-8
export LANGUAGE=en_AU.UTF-8
export DEBIAN_FRONTEND=noninteractive
echo $LC_ALL
echo $LANGUAGE
echo $DEBIAN_FRONTEND
echo "*********************************************************"
echo "Install repositories"
echo "*********************************************************"
apt-get install -y software-properties-common
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic main restricted'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic-updates main restricted'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic universe'
apt-add-repository -y 'deb http://us.archive.ubuntu.com/ubuntu/ bionic-updates universe'
echo "*********************************************************"
echo "Update repositories and install desktop"
echo "*********************************************************"
apt update
apt upgrade -y
apt install -y locales
locale-gen en_AU.UTF-8
#Installing git
apt install -y git
apt install -y python3-pip
apt install -y python3-venv
pip3 install pyqt5
cd /opt
git clone https://github.com/AustralianSynchrotron/imblproc.git
%runscript
$*
Collection
- Name: Characterisation-Virtual-Laboratory/CharacterisationVL-Software
- License: GNU General Public License v3.0
View on Datalad
Metrics
key | value |
---|---|
id | /containers/Characterisation-Virtual-Laboratory-CharacterisationVL-Software-imblproc |
collection name | Characterisation-Virtual-Laboratory/CharacterisationVL-Software |
branch | master |
tag | imblproc |
commit | a378c8d113eb138061c9103201a423640682bea8 |
version (container hash) | 625168682ae7c3b46e14c2b6fee01935 |
build date | 2019-04-05T06:18:03.568Z |
size (MB) | 3398 |
size (bytes) | 1414262815 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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