CampagneLaboratory/GobyWeb-Singularity:latest
$ singularity pull shub://CampagneLaboratory/GobyWeb-Singularity:latest
Singularity Recipe
Bootstrap: docker
From: artifacts/base:1.5.4
%runscript
echo "Nothing to do here"
%post
echo "Here we are installing software and other dependencies for the container!"
mkdir /gobyweb
cp ${HOME}/.bashrc /gobyweb
mkdir -p /scratchLocal/gobyweb2
mkdir -p /scratchLocal/gobyweb2/ARTIFACT_REPOSITORY-dev
mkdir -p /athena/campagnelab/store/data/gobyweb/dev/FILESET_AREA
mkdir -p /athena/campagnelab/scratch/data/gobyweb/dev/GOBYWEB_SGE_JOBS
#libs needed by the R package Cairo
yum install -y libXt-devel giflib-devel libjpeg-turbo-devel
yum install -y cairo cairo-devel cairomm-devel pango pango-devel pangomm pangomm-devel
yum clean all
rm -fr /etc/mail
mkdir -p /home/gobyweb/mail
%test
if [ ! -d /scratchLocal/gobyweb2 ]; then
echo "%post did not run correctly"
exit 127
fi
if [ ! -d /scratchLocal/gobyweb2/ARTIFACT_REPOSITORY-dev ]; then
echo "%post did not run correctly"
exit 127
fi
Collection
- Name: CampagneLaboratory/GobyWeb-Singularity
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CampagneLaboratory-GobyWeb-Singularity-latest |
collection name | CampagneLaboratory/GobyWeb-Singularity |
branch | master |
tag | latest |
commit | 25989927362f7a5e8cc388d57d6fccb8edb498cd |
version (container hash) | e01b7773699ff59dda27798a31069448 |
build date | 2018-01-18T18:06:22.613Z |
size (MB) | 1505 |
size (bytes) | 506298399 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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