CNC-UMCG/cnc_meica:latest
$ singularity pull shub://CNC-UMCG/cnc_meica:latest
Singularity Recipe
Bootstrap: shub
From: CNC-UMCG/cnc_base
%runscript
exec meica.py "$@"
%environment
PATH=$PATH:/usr/abin
export PATH
%post
apt-get install -y software-properties-common
add-apt-repository universe
apt-get update -y
apt-get install -y tcsh xfonts-base python-qt4 \
gsl-bin netpbm gnome-tweak-tool \
libjpeg62 xvfb xterm vim curl \
gedit evince \
libxm4 build-essential
# install SciPy
apt-get install -y python-numpy python-scipy python-matplotlib \
ipython ipython-notebook \
python-pandas python-sympy python-nose
mkdir /usr/abin
cd
curl -O https://afni.nimh.nih.gov/pub/dist/bin/linux_ubuntu_16_64/@update.afni.binaries
tcsh @update.afni.binaries -package linux_ubuntu_16_64 -do_extras -bindir /usr/abin
export R_LIBS=$HOME/R
export PATH=$PATH:/usr/abin
bash
################
# Install R #
################
mkdir $R_LIBS
echo 'export R_LIBS=$HOME/R' >> ~/.bashrc
bash
curl -O https://afni.nimh.nih.gov/pub/dist/src/scripts_src/@add_rcran_ubuntu.tcsh
tcsh @add_rcran_ubuntu.tcsh
/usr/abin/rPkgsInstall -pkgs ALL
Collection
- Name: CNC-UMCG/cnc_meica
- License: GNU General Public License v2.0
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CNC-UMCG-cnc_meica-latest |
collection name | CNC-UMCG/cnc_meica |
branch | master |
tag | latest |
commit | ddb509d99dbca1128bb18bdfb74c62e5fb5891bb |
version (container hash) | 4df93b0332122927e8b7e49c14dc136f |
build date | 2018-03-29T09:26:05.795Z |
size (MB) | 7392 |
size (bytes) | 3343052831 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
Feedback
Was this page helpful?
Glad to hear it! Please tell us how we can improve.
Sorry to hear that. Please tell us how we can improve.