CNC-UMCG/cnc_afni:latest
$ singularity pull shub://CNC-UMCG/cnc_afni:latest
Singularity Recipe
Bootstrap: shub
From: CNC-UMCG/cnc_r
%environment
export R_LIBS=$HOME/R
mkdir $R_LIBS
export PATH=$PATH:/usr/share/afni
export R_LIBS=$HOME/R
%post
# afni dependencies
## apt-get install -y libmotif4 libmotif-dev motif-clients gsl-bin netpbm xvfb gnome-tweak-tool libjpeg62 xterm gedit evince
echo "deb http://security.ubuntu.com/ubuntu precise-security main" >> /etc/apt/sources.list
apt-get update
apt-get install -y libxp6 tcsh
apt-get install -y python-qt4 r-base
# install afni
wget https://afni.nimh.nih.gov/pub/dist/tgz/linux_ubuntu_16_64.tgz
tar xvzf linux_ubuntu_16_64.tgz -C /usr/share/
mv /usr/share/linux_ubuntu_16_64 /usr/share/afni
curl -O https://afni.nimh.nih.gov/pub/dist/src/scripts_src/@add_rcran_ubuntu.tcsh
tcsh @add_rcran_ubuntu.tcsh
#rPkgsInstall -pkgs ALL
#afni_system_check.py -check_all > out.afni_system_check.txt
Collection
- Name: CNC-UMCG/cnc_afni
- License: None
View on Datalad
Metrics
key | value |
---|---|
id | /containers/CNC-UMCG-cnc_afni-latest |
collection name | CNC-UMCG/cnc_afni |
branch | master |
tag | latest |
commit | 1e2c267d68212d6db3784181b263ae7d6bfa9fde |
version (container hash) | 763932047560de9ecea98ccd8e91264b |
build date | 2021-04-09T19:11:18.324Z |
size (MB) | 5509 |
size (bytes) | 2933506079 |
SIF | Download URL (please use pull with shub://) |
Datalad URL | View on Datalad |
Singularity Recipe | Singularity Recipe on Datalad |
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